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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99685607_99685969_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

99685607 - 99685969

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TATGGTTCAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTCTATGTAAAA

Flanking Amino Acid:

QLLASMSDHNGNKESNEEFV

Intron Amino Acid Position:

4466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

74.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

56.9

0.16

1.2

57.3

42.2

Minor 5ss

32.7

-2

3.1

37.9

40.9

Minor BPS

47.5

-0.1

2.2

65.09

41.5

Associated Gene:

Gene:

MDN1

Ensembl Gene ID:

ENSAPLG00000000987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001146

99667299 - 99757983

90685