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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99694451_99695569_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

99694451 - 99695569

Intron Length:

1119

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAACATG

5'SS Class:

strong_major

3'SS Sequence:

TTCAGAAACTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTTCAGAAACT

Flanking Amino Acid:

IEKYVQEHTEQMSLKMLVST

Intron Amino Acid Position:

3837

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

42.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

45.3

-0.2

1.7

48.3

43.1

Minor 5ss

-2.1

4.1

47.8

47.9

Minor BPS

48.2

-0

2.5

77.89

44.1

Associated Gene:

Gene:

MDN1

Ensembl Gene ID:

ENSAPLG00000000987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001146

99667299 - 99757983

90685