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Intron Name: Anas_platyrhynchos_platyrhynchos_3_997108_997832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

997108 - 997832

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TATTGATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CATTCTTTAAAA

Flanking Amino Acid:

RVTDDYNWTFRFTGRTIKNV

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.4

0.59

0.9

69.9

40.3

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

70.6

0.64

1.4

73.69

37.9

Associated Gene:

Gene:

SPTLC3

Ensembl Gene ID:

ENSAPLG00000011146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048085

964035 - 1047987

83953

ENSAPLT00000021081

964035 - 1045732

81698

ENSAPLT00000011600

954416 - 1047987

93572