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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99715787_99716053_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99715787 - 99716053

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGAATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTTTTGAAT

Flanking Amino Acid:

WLLMDNVNFCNPSVLDRLNA

Intron Amino Acid Position:

2242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

29.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.9

0.49

67.2

38.2

Minor 5ss

33.8

-1.8

3.5

47.5

42.5

Minor BPS

63.8

0.52

1.4

81.08

34.1

Associated Gene:

Gene:

MDN1

Ensembl Gene ID:

ENSAPLG00000000987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001146

99667299 - 99757983

90685