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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99717448_99718263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99717448 - 99718263

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TCAACTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

GCTCTTTCAACT

Flanking Amino Acid:

RMRTREDKEKVVSVFKDIFG

Intron Amino Acid Position:

1982

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

68.6

0.42

65.6

40.6

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

55.8

0.26

1.5

69.87

41.2

Associated Gene:

Gene:

MDN1

Ensembl Gene ID:

ENSAPLG00000000987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001146

99667299 - 99757983

90685