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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99729268_99729346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99729268 - 99729346

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAGAT

U12 Branch Point Sequence:

TGTGCCTGAAGC

Flanking Amino Acid:

FSGESVKKLLAKFSTQMSVM

Intron Amino Acid Position:

1336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

78.3

32.5

Major BPS

66.6

0.41

1.1

62.9

43.3

Major PPT

83.9

0.76

0.9

80.6

Minor 5ss

38.9

-1.3

2.9

44.3

43.6

Minor BPS

55.3

0.14

1.9

68.01

43.3

Associated Gene:

Gene:

MDN1

Ensembl Gene ID:

ENSAPLG00000000987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001146

99667299 - 99757983

90685