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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99734067_99734710_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99734067 - 99734710

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TCACTCTTATTT

Flanking Amino Acid:

VSKNTVQGIVNFYLAVRKEA

Intron Amino Acid Position:

928

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

79.1

0.72

69.3

38.4

Major PPT

88.8

0.87

0.7

84.1

30.7

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

56.1

0.27

1.6

69.57

41.8

Associated Gene:

Gene:

MDN1

Ensembl Gene ID:

ENSAPLG00000000987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001146

99667299 - 99757983

90685