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Intron Name: Anas_platyrhynchos_platyrhynchos_3_997982_1008430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

997982 - 1008430

Intron Length:

10449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATATTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

CTTTGTATATTT

Flanking Amino Acid:

TGICSTRQEMGTLDKHVELE

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.3

31.1

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

83.2

0.75

0.8

77.7

36.2

Minor 5ss

29.2

-2.4

2.5

36.8

Minor BPS

45.3

-0.2

2.2

67.91

43.9

Associated Gene:

Gene:

SPTLC3

Ensembl Gene ID:

ENSAPLG00000011146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048085

964035 - 1047987

83953

ENSAPLT00000021081

964035 - 1045732

81698

ENSAPLT00000011600

954416 - 1047987

93572