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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10001434_10002282_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10001434 - 10002282

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

AACACCAACTTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TCTCTTGCAACA

Flanking Amino Acid:

IPLAGYLLLETDVDVNSTTY

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

58.9

0.22

49.8

35.1

Major PPT

49.8

-0

0.9

45.2

35.6

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

45.5

-0.3

2.1

40.4

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198