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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10002386_10003246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10002386 - 10003246

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

GTTTCTTGCACT

Flanking Amino Acid:

TKLAAVLKAAGADPHIENFE

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

80.4

33.8

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

-1.1

3.2

56.4

Minor BPS

59.9

0.39

1.9

81.55

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198