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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10003369_10003715_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10003369 - 10003715

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTATTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTGCTAAATA

Flanking Amino Acid:

TPLDMAANCEVYDILNDKPY

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

75.6

0.58

0.8

73.9

36.7

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

62.2

0.38

2.1

78.78

38.5

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014534

9962245 - 10005442

43198

ENSAPLT00000024529

9962245 - 10005442

43198