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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10003786_10004128_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10003786 - 10004128

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCATCT

5'SS Class:

weak_major

3'SS Sequence:

CTCTGTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ATTTGTATAAAT

Flanking Amino Acid:

AAVSEDLLTQGHVRELNESV

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

67.8

38.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

76.6

0.6

0.8

68.5

37.3

Minor 5ss

57.8

0.26

2.4

75.1

40.8

Minor BPS

50.2

0.09

2.1

76.57

39.8

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198