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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10004302_10004439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10004302 - 10004439

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTGG

5'SS Class:

major

3'SS Sequence:

TCTTCTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGCAT

U12 Branch Point Sequence:

TGGTGCTGAGCA

Flanking Amino Acid:

PSRTLLDNYEVSGGTIEELS

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

63.2

43.6

Major BPS

49.2

-0

1.5

59.7

46.7

Major PPT

81.7

0.71

0.7

24.1

Minor 5ss

36.2

-1.6

3.2

47.4

Minor BPS

47.1

-0.2

2.1

61.13

44.6

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198