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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10004615_10005254_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10004615 - 10005254

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CATTTCCCATCT

Flanking Amino Acid:

SPPTFAKRDTGEVYNSKFQD

Intron Amino Acid Position:

922

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

86.3

0.82

0.7

84.1

23.9

Minor 5ss

34.9

-1.7

3.3

47.4

Minor BPS

45.3

-0.2

2.1

65.78

44.5

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198