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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10023009_10024470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10023009 - 10024470

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGTG

5'SS Class:

major

3'SS Sequence:

TTTCTTGACCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

KFKDTIYLTQVMQAQCTKTE

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

69.9

41.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.6

0.33

1.1

64.2

Minor 5ss

39.6

-1.2

3.5

55.7

48.5

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

MANBA

Ensembl Gene ID:

ENSAPLG00000014676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015353

10011067 - 10055987

44921