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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10041831_10044247_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10041831 - 10044247

Intron Length:

2417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTCTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

AATTCCTGCATT

Flanking Amino Acid:

LIYFSLTPFFVKSTQQWSLE

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

74.1

36.5

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

77.1

0.61

0.7

76.2

Minor 5ss

34.7

-1.7

2.9

41.5

39.2

Minor BPS

56.9

0.3

1.9

76.7

39.8

Associated Gene:

Gene:

MANBA

Ensembl Gene ID:

ENSAPLG00000014676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015353

10011067 - 10055987

44921