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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10049818_10055810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10049818 - 10055810

Intron Length:

5993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

GGTCTGTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TGGTCTGTTATT

Flanking Amino Acid:

TALHRRGLVQDPYYRFNDVM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

64.7

0.33

62.9

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

-0.1

2.2

67.81

43.6

Associated Gene:

Gene:

MANBA

Ensembl Gene ID:

ENSAPLG00000014676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015353

10011067 - 10055987

44921