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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10113807_10116444_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10113807 - 10116444

Intron Length:

2638

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAGGGCCC

5'SS Class:

major

3'SS Sequence:

GTACCAATGGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACCAAT

U12 Branch Point Sequence:

AGACCTTGAATA

Flanking Amino Acid:

APVGALAIGLCFCLLIQTQF

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.3

35.6

Major BPS

64.1

0.35

1.2

33.2

Major PPT

48.5

-0

1.2

46.5

39.4

Minor 5ss

20.4

-3.4

30.1

37.1

Minor BPS

52.5

0.07

1.4

58.17

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000963

10113711 - 10127452

13742