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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10117671_10117875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10117671 - 10117875

Intron Length:

205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTGCACAGAAAT

Flanking Amino Acid:

SVTSLRPETVGLCVATLSIA

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.8

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

81.5

0.71

0.9

75.5

38.4

Minor 5ss

38.4

-1.3

45.7

43.4

Minor BPS

44.9

-0.3

1.9

66.46

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000963

10113711 - 10127452

13742