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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10138021_10139362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10138021 - 10139362

Intron Length:

1342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GACCTTCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TTCACATTGACC

Flanking Amino Acid:

NMSSVASSIKGVVNRFVYST

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

76.2

39.9

Major BPS

77.7

0.69

83.3

27.7

Major PPT

62.9

0.29

39.6

Minor 5ss

31.5

-2.1

2.5

37.7

39.6

Minor BPS

61.3

0.34

1.7

72.04

39.1

Associated Gene:

Gene:

BDH2

Ensembl Gene ID:

ENSAPLG00000001905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002072

10135119 - 10145959

10841