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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10379611_10385630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10379611 - 10385630

Intron Length:

6020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

STQTELVGHDALWNSSCSEG

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.3

0.7

82.7

32.1

Minor 5ss

38.5

-1.3

2.8

50.4

39.2

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

CCSER1

Ensembl Gene ID:

ENSAPLG00000009352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009726

10379530 - 10816444

436915