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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10415202_10435099_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10415202 - 10435099

Intron Length:

19898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTATGCCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTTACCTTCAGT

Flanking Amino Acid:

ELIAQLREELSLLFEWNGVH

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

79.1

0.72

69.3

38.4

Major PPT

68.7

0.42

63.2

38.1

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

61.6

0.45

2.1

84.56

42.1

Associated Gene:

Gene:

CCSER1

Ensembl Gene ID:

ENSAPLG00000009352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044497

10415069 - 10726917

311849