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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10435184_10483341_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10435184 - 10483341

Intron Length:

48158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTA

5'SS Class:

major

3'SS Sequence:

AATATTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTCTTTTAATA

Flanking Amino Acid:

PLPEEPLLFKDGIKDECSVL

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

69.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.58

0.9

70.4

40.2

Minor 5ss

38.6

-1.3

3.6

55.4

48.8

Minor BPS

68.4

0.57

1.2

71.66

34.9

Associated Gene:

Gene:

CCSER1

Ensembl Gene ID:

ENSAPLG00000009352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027434

10165159 - 10726917

561759

ENSAPLT00000044497

10415069 - 10726917

311849

ENSAPLT00000009731

10351709 - 10726873

375165

ENSAPLT00000040008

10406391 - 10726917

320527

ENSAPLT00000009726

10379530 - 10816444

436915

ENSAPLT00000039380

10434599 - 10778775

344177

ENSAPLT00000029480

10432223 - 10726917

294695

ENSAPLT00000045422

10384275 - 10726917

342643