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Intron Name: Anas_platyrhynchos_platyrhynchos_4_1063674_1064199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1063674 - 1064199

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCACG

5'SS Class:

major

3'SS Sequence:

TCTTGGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGACAC

U12 Branch Point Sequence:

GTGCCGCTGACA

Flanking Amino Acid:

DEYQLFEELGKGAFSVVRRC

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

69.1

41.8

Major BPS

48.1

-0.1

1.2

56.1

39.6

Major PPT

82.5

0.73

0.9

76.3

37.7

Minor 5ss

41.4

-1

2.8

50.6

39.8

Minor BPS

44.2

-0.4

2.3

57.64

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028870

951004 - 1064888

113885

ENSAPLT00000018641

951004 - 1064888

113885