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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10669279_10722754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10669279 - 10722754

Intron Length:

53476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TAATATGTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATT

Flanking Amino Acid:

SSSSSKMNSMDVLNNLGSCE

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

61.5

0.26

1.1

45.2

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

78.1

0.96

86.75

33.6

Associated Gene:

Gene:

CCSER1

Ensembl Gene ID:

ENSAPLG00000009352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027434

10165159 - 10726917

561759

ENSAPLT00000042103

10434599 - 10726917

292319

ENSAPLT00000009731

10351709 - 10726873

375165

ENSAPLT00000040008

10406391 - 10726917

320527

ENSAPLT00000009726

10379530 - 10816444

436915

ENSAPLT00000039380

10434599 - 10778775

344177

ENSAPLT00000045422

10384275 - 10726917

342643

ENSAPLT00000029480

10432223 - 10726917

294695

ENSAPLT00000044497

10415069 - 10726917

311849