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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10872514_10875282_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10872514 - 10875282

Intron Length:

2769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGAACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTTTTGTGAACA

Flanking Amino Acid:

PGVPQDPSGPALTQKMNEKI

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.4

33.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

58.1

0.18

1.2

58.1

45.8

Minor 5ss

38.3

-1.3

2.8

51.3

45.1

Minor BPS

54.7

0.15

2.2

72.67

39.1

Associated Gene:

Gene:

MMRN1

Ensembl Gene ID:

ENSAPLG00000009378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009765

10856461 - 10898193

41733