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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10924679_10931190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10924679 - 10931190

Intron Length:

6512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

GTTCTCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATATTTTCAACC

Flanking Amino Acid:

GKTKEGVLYVGSRTKEGVVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.3

43.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

74.9

0.56

0.9

73.6

Minor 5ss

30.2

-2.3

3.3

31.3

42.9

Minor BPS

0.36

1.5

69.51

35.6

Associated Gene:

Gene:

SNCA

Ensembl Gene ID:

ENSAPLG00000009456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039126

10924533 - 10992141

67609

ENSAPLT00000037221

10923694 - 10993529

69836

ENSAPLT00000009869

10924533 - 10992746

68214