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Intron Name: Anas_platyrhynchos_platyrhynchos_4_10924679_10939545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10924679 - 10939545

Intron Length:

14867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

TCTGCTTCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

AGAGGTGTAATG

Flanking Amino Acid:

GKTKEGVLYVVAEKTKEQVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.3

43.4

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

78.9

0.65

0.8

76.8

31.9

Minor 5ss

30.2

-2.3

3.3

31.3

42.9

Minor BPS

38.1

-1

2.2

38.39

39.3

Associated Gene:

Gene:

SNCA

Ensembl Gene ID:

ENSAPLG00000009456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044339

10924533 - 10992141

67609