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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11078704_11081894_R

Intron Information:

Intron Rank:

149920

Intron Class:

major

Intron Phase:

Intron Coordinates:

11078704 - 11081894

Intron Length:

3191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTATGTCAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

TGTCCTGAAGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.2

57.9

41.2

Major BPS

69.6

0.49

59.5

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

42.6

-0.8

2.8

53.5

43.8

Minor BPS

40.9

-0.6

2.3

61.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019415

11074820 - 11082524

7705