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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11194160_11216692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11194160 - 11216692

Intron Length:

22533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCTTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.2

0.79

0.7

81.2

30.6

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

68.9

0.67

1.6

82.98

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031842

11182876 - 11292446

109571

ENSAPLT00000009952

11182910 - 11291446

108537

ENSAPLT00000035393

11182876 - 11291446

108571