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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11216771_11244040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11216771 - 11244040

Intron Length:

27270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCCTC

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

CTAAATTTAATT

Flanking Amino Acid:

MEHLSSQEDERPMS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

67.1

44.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

37.8

-1.4

3.1

45.6

Minor BPS

57.2

0.31

1.5

70.31

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009952

11182910 - 11291446

108537