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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11244083_11253400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11244083 - 11253400

Intron Length:

9318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTACT

5'SS Class:

major

3'SS Sequence:

TTCTTTTACACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

DERPMSPFYVSSHVSQVSSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

34.3

Major BPS

74.2

0.6

39.4

Major PPT

83.1

0.74

0.8

79.9

31.1

Minor 5ss

44.5

-0.6

2.5

61.4

42.8

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041342

11232782 - 11294284

61503

ENSAPLT00000009952

11182910 - 11291446

108537