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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11244083_11258031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11244083 - 11258031

Intron Length:

13949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTACT

5'SS Class:

major

3'SS Sequence:

CTTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AGTGTGTTAAAC

Flanking Amino Acid:

DERPMSPFYVREVIDKENIP

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

34.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

85.3

0.79

0.8

84.6

30.3

Minor 5ss

44.5

-0.6

2.5

61.4

42.8

Minor BPS

46.5

-0.2

2.2

58.15

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035393

11182876 - 11291446

108571

ENSAPLT00000031842

11182876 - 11292446

109571