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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11253446_11255010_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11253446 - 11255010

Intron Length:

1565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TTCGGCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAC

U12 Branch Point Sequence:

TTGACCTTATTT

Flanking Amino Acid:

QVSSNMPATGEYLEKTIRSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

73.4

36.4

Major BPS

69.9

0.49

0.9

61.1

36.4

Major PPT

69.3

0.43

1.1

64.3

41.6

Minor 5ss

38.5

-1.3

3.3

49.1

41.3

Minor BPS

0.58

1.6

80.58

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041342

11232782 - 11294284

61503