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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11255191_11258031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11255191 - 11258031

Intron Length:

2841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGATCC

5'SS Class:

major

3'SS Sequence:

CTTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AGTGTGTTAAAC

Flanking Amino Acid:

EQEEARRNRDMEVIDKENIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

62.7

36.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

85.3

0.79

0.8

84.6

30.3

Minor 5ss

40.6

-1.1

3.3

56.1

41.5

Minor BPS

46.5

-0.2

2.2

58.15

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041342

11232782 - 11294284

61503

ENSAPLT00000040402

11254934 - 11264227

9294