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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11261552_11262266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11261552 - 11262266

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTTTCT

Flanking Amino Acid:

PDDMEVLSEESKESESGEVI

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

85.8

25.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.4

0.77

0.7

80.5

31.5

Minor 5ss

40.8

-1

58.4

46.2

Minor BPS

43.2

-0.4

3.5

75.76

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031842

11182876 - 11292446

109571

ENSAPLT00000009952

11182910 - 11291446

108537

ENSAPLT00000041342

11232782 - 11294284

61503

ENSAPLT00000040402

11254934 - 11264227

9294

ENSAPLT00000035393

11182876 - 11291446

108571