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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11267630_11275245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11267630 - 11275245

Intron Length:

7616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTACTGTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

TTTGTCTTACTG

Flanking Amino Acid:

TALCDDNNWEEPIPALSSWQ

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

0.45

57.8

Major PPT

72.8

0.51

0.9

65.5

40.8

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

57.9

0.11

1.8

66.07

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031842

11182876 - 11292446

109571

ENSAPLT00000009952

11182910 - 11291446

108537

ENSAPLT00000041342

11232782 - 11294284

61503

ENSAPLT00000035393

11182876 - 11291446

108571