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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11283136_11284689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11283136 - 11284689

Intron Length:

1554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

ACACCTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TACTTGTTAACA

Flanking Amino Acid:

LSRANTIPIIGSPSSKRRSP

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

72.4

32.2

Major BPS

81.9

0.79

0.9

80.1

Major PPT

64.1

0.32

56.6

Minor 5ss

34.6

-1.8

3.3

45.9

43.7

Minor BPS

60.5

0.32

2.1

71.72

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031842

11182876 - 11292446

109571

ENSAPLT00000009952

11182910 - 11291446

108537

ENSAPLT00000041342

11232782 - 11294284

61503