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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11288630_11289361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11288630 - 11289361

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGTTGA

5'SS Class:

major

3'SS Sequence:

TTAAACCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTATGTTTAAAC

Flanking Amino Acid:

MGLSNLHEASIPELLEQLQE

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

68.2

39.6

Major BPS

80.4

0.76

80.3

31.8

Major PPT

62.8

0.29

39.5

Minor 5ss

40.9

-1

3.1

52.9

44.5

Minor BPS

60.5

0.31

1.9

72.33

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031842

11182876 - 11292446

109571

ENSAPLT00000009952

11182910 - 11291446

108537

ENSAPLT00000041342

11232782 - 11294284

61503

ENSAPLT00000035393

11182876 - 11291446

108571