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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11304481_11305100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11304481 - 11305100

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TGTTACTGACCT

Flanking Amino Acid:

SDIDLKKPLKVIFDGEEAVD

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

85.7

0.8

80.7

31.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

55.6

0.26

79.08

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020217

11301447 - 11328061

26615

ENSAPLT00000010831

11297016 - 11328029

31014