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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11305272_11306351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11305272 - 11306351

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTATCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CCTCTGTTATCT

Flanking Amino Acid:

LQTDAELQMQVAINGANLQN

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

83.7

34.8

Major BPS

100

1.24

0.5

100

Major PPT

79.5

0.66

0.9

73.1

36.4

Minor 5ss

45.4

-0.5

2.9

66.6

44.4

Minor BPS

45.8

-0.2

2.3

64.15

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010831

11297016 - 11328029

31014

ENSAPLT00000020217

11301447 - 11328061

26615