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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11307912_11308427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11307912 - 11308427

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTTTTCTTACCT

Flanking Amino Acid:

ALRLLEKLHKVNQKVKHVEY

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.2

0.66

0.8

74.1

35.7

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

73.6

0.82

1.6

88.23

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020217

11301447 - 11328061

26615

ENSAPLT00000010831

11297016 - 11328029

31014