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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11308592_11310304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11308592 - 11310304

Intron Length:

1713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTATTTTTATGT

Flanking Amino Acid:

RLDTNPSKVLDNWWSQVCPR

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.7

0.94

0.6

84.4

30.5

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

49.8

0.06

1.9

68.63

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020217

11301447 - 11328061

26615

ENSAPLT00000010831

11297016 - 11328029

31014