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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11316012_11317023_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11316012 - 11317023

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGGAG

5'SS Class:

major

3'SS Sequence:

GATTTGCTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GGGTCCTAAATG

Flanking Amino Acid:

GEEHTAVLTKSGGVFTFGAG

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

57.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

68.9

0.43

62.6

42.9

Minor 5ss

26.5

-2.7

3.7

36.3

48.1

Minor BPS

55.2

0.02

1.8

56.67

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020217

11301447 - 11328061

26615

ENSAPLT00000010831

11297016 - 11328029

31014