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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11321233_11327803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11321233 - 11327803

Intron Length:

6571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

LGHESEGSKPEQIGALAGQH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

0.22

1.2

52.4

43.3

Major PPT

91.7

0.94

0.6

91.6

19.7

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020217

11301447 - 11328061

26615

ENSAPLT00000010831

11297016 - 11328029

31014