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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11339205_11341836_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11339205 - 11341836

Intron Length:

2632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

CCGCGGCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CTCTCCTCACAG

Flanking Amino Acid:

REDEFKMKLQVVFVGEEGQD

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.5

27.4

Major BPS

72.4

0.56

73.5

32.5

Major PPT

58.1

0.18

0.9

49.5

34.1

Minor 5ss

41.3

-1

3.1

56.6

Minor BPS

46.5

-0.4

52.48

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012280

11334536 - 11355963

21428