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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11339471_11339570_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11339471 - 11339570

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGGCCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATTAT

U12 Branch Point Sequence:

TTTTTCTCGTTC

Flanking Amino Acid:

LVCPLSKRPLRYDESANELV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

59.2

0.23

1.3

43.5

Major PPT

63.5

0.31

41.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

42.3

-0.6

3.5

68.96

37.3

Associated Gene:

Gene:

PYURF

Ensembl Gene ID:

ENSAPLG00000011502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011968

11339322 - 11343465

4144