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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11351174_11351966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11351174 - 11351966

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TTTTTCTGAACA

Flanking Amino Acid:

GAKVSQVACGRQHTLVYVPS

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

82.6

0.81

0.8

71.7

Major PPT

79.8

0.67

77.5

35.6

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

79.8

0.93

1.2

88.1

28.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012280

11334536 - 11355963

21428