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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11353810_11354358_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11353810 - 11354358

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTCTCT

5'SS Class:

major

3'SS Sequence:

TGCACGTGTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGACAC

U12 Branch Point Sequence:

TTTTGTTGCACG

Flanking Amino Acid:

GDHHAMALCRGGELFTWGQN

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.2

41.5

Major BPS

49.5

-0

1.2

58.5

38.2

Major PPT

52.7

0.06

1.2

51.8

41.8

Minor 5ss

45.2

-0.5

3.1

65.8

45.4

Minor BPS

46.8

-0.4

2.3

63.65

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012280

11334536 - 11355963

21428