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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11354436_11355132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11354436 - 11355132

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCCTTATCT

Flanking Amino Acid:

AASSDDCFKPRLVKELGNQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.4

0.62

0.8

73.1

31.6

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

85.6

1.19

1.4

100.1

28.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012280

11334536 - 11355963

21428